MolNFT v1 · #173618 · protein
Cryo-EM structure of the human cak bound to ICEC0942 at 2.5 ångströms resolution
7B5O: “Cryo-EM structure of the human cak bound to ICEC0942 at 2.5 ångströms resolution”. Electron microscopy, 1 ligand (I74). MolNFT v1 #173618 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7B5O
- Type
- protein
- Length
- 643 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P51948, P51946, P50613
- Ligands
- I74
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 65 | — | P51948 |
| I | — | protein | 281 | — | P51946 |
| J | — | protein | 297 | — | P50613 |
Ligands and binding sites
- I74 · (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol · ligand · chains J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7B5O · Cryo-EM structure of the human CAK bound to ICEC0942 at 2.5 Angstroms resolution · the same entry in another collection · chain H against H, TM-score 1.00
- P51946 · AlphaFold monomer V2.0 prediction for cyclin-H (P51946) · a predicted model of the same protein · chain I against A, TM-score 0.99
- P50613 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinase 7 (P50613) · a predicted model of the same protein · chain J against A, TM-score 0.93
- P51948 · AlphaFold monomer V2.0 prediction for cdk-activating kinase assembly factor MAT1 (P51948) · a predicted model of the same protein · chain H against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P51948
- Every structure of UniProt P51946
- Every structure of UniProt P50613
- Elsewhere: RCSB PDB 7B5O · PDBe 7B5O · UniProt P51948 · UniProt P51946 · UniProt P50613
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