MolNFT v1 · #17311 · protein

Solution structure of the third RNA recognition motif (rrm) of U2AF65 in complex with an N-terminal SF1 peptide

1OPI · Splicing factor U2AF 65 kda subunit: “Solution structure of the third RNA recognition motif (rrm) of U2AF65 in complex with an N-terminal SF1…”. Solution nmr. MolNFT v1 #17311 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 1OPI
Type: protein
Length: 117 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Splicing factor U2AF 65 kda subunit; Splicing factor SF1
UniProt: P26368, Q15637

Structure

solution nmr · 2 distinct chains · 26% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Splicing factor U2AF 65 kda subunit	protein	104	30% helix, 20% strand	P26368
B	Splicing factor SF1	protein	13	0% helix, 0% strand	Q15637

Interfaces

1 interface between chains.

A–B · 647 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

1OPI · Solution structure of the third RNA recognition motif (rrm) of U2AF65 in complex with an… · the same entry in another collection · chain A against A, TM-score 1.00
P26368 · AlphaFold monomer V2.0 prediction for splicing factor U2AF 65 kda subunit (P26368) · a predicted model of the same protein · chain A against A, TM-score 0.90
Q15637 · AlphaFold monomer V2.0 prediction for splicing factor 1 (Q15637) · a predicted model of the same protein · chain B against A, TM-score 0.37

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26368
Every structure of UniProt Q15637
Elsewhere: RCSB PDB 1OPI · PDBe 1OPI · UniProt P26368 · UniProt Q15637

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