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MolNFT v1 · #172365 · protein + DNA

Cryoem structure of cgas nucleosome complex

7A08: “Cryoem structure of cgas nucleosome complex”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #172365 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7A08
Type
protein + DNA
Length
1,333 residues
Chains
11
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8C6L5, Q93077, P62807, P84243, P62805
Ligands
ZN

Structure

electron microscopy · 11 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
a—protein360—Q8C6L5
I—dna132——
J—dna131——
b—protein105—Q93077
c—protein93—P62807
d—protein95—P84243
e—protein77—P62805
f—protein93—Q93077
g—protein90—P62807
h—protein78—P84243
i—protein79—P62805

Ligands and binding sites

  • ZN · Zinc ion · metal · chains a

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7A08 · CryoEM Structure of cGAS Nucleosome complex · the same entry in another collection · chain i against i, TM-score 1.00
  • P84243 · AlphaFold monomer V2.0 prediction for histone H3.3 (P84243) · a predicted model of the same protein · chain d against A, TM-score 0.99

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