MolNFT v1 · #170944 · protein
Crystal structure of the camp-dependent protein kinase a in complex with aminofasudil and pki (5-24)
6YNT: “Crystal structure of the camp-dependent protein kinase a in complex with aminofasudil and pki (5-24)”. X-ray diffraction, 1 ligand (LRT). MolNFT v1 #170944 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YNT
- Type
- protein
- Length
- 365 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P25321, P63248
- Ligands
- LRT
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 346 | — | P25321 |
| B | — | protein | 19 | — | P63248 |
Ligands and binding sites
- LRT · 5-(1,4-diazepan-1-ylsulfonyl)isoquinolin-1-amine · ligand · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A, B
- DMS · Dimethyl sulfoxide · additive · 2 copies · chains A
- MRD · (4R)-2-methylpentane-2,4-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YNT · Crystal structure of the cAMP-dependent protein kinase A in complex with aminofasudil and… · the same entry in another collection · chain A against A, TM-score 1.00
- P63248 · AlphaFold monomer V2.0 prediction for camp-dependent protein kinase inhibitor alpha… · a predicted model of the same protein · chain B against A, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25321
- Every structure of UniProt P63248
- Elsewhere: RCSB PDB 6YNT · PDBe 6YNT · UniProt P25321 · UniProt P63248
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