MolNFT v1 · #169849 · protein
Salmonella typhimurium tryptophan synthase complexed with D-tryptophan and D-glycerol-3-phosphate
6XOY: “Salmonella typhimurium tryptophan synthase complexed with D-tryptophan and D-glycerol-3-phosphate”. X-ray diffraction, 3 ligands (1GP, VB4, NA). MolNFT v1 #169849 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XOY
- Type
- protein
- Length
- 663 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0D6FWC1, P0A2K1
- Ligands
- 1GP, VB4, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 267 | — | A0A0D6FWC1 |
| B | — | protein | 396 | — | P0A2K1 |
Ligands and binding sites
- 1GP · Sn-glycerol-1-phosphate · ligand · chains A
- VB4 · (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methylidene)-D-tryptophan · ligand · chains B
- NA · Sodium ion · metal · chains B
- DMS · Dimethyl sulfoxide · additive · 10 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XOY · Salmonella typhimurium tryptophan synthase complexed with D-tryptophan and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0D6FWC1
- Every structure of UniProt P0A2K1
- Elsewhere: RCSB PDB 6XOY · PDBe 6XOY · UniProt A0A0D6FWC1 · UniProt P0A2K1
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