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MolNFT v1 · #165639 · protein

GPCR-beta arrestin structure in lipid bilayer

6U1N: “GPCR-beta arrestin structure in lipid bilayer”. Electron microscopy, 1 ligand (2CU). MolNFT v1 #165639 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6U1N
Type
protein
Length
864 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P08172, P30518, P29066, V9HW68, Q7Z3Y4
Ligands
2CU

Structure

electron microscopy · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
R—protein278—P08172, P30518
C—protein359—P29066
H—protein119—V9HW68
L—protein108—Q7Z3Y4

Ligands and binding sites

  • 2CU · 3-amino-5-chloro-N-cyclopropyl-4-methyl-6-[2-(4-methylpiperazin-1-yl)-2-oxoethoxy]thieno[2,3-b]pyridine-2-carboxamide · ligand · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6U1N · GPCR-Beta arrestin structure in lipid bilayer · the same entry in another collection · chain R against R, TM-score 1.00
  • P29066 · AlphaFold monomer V2.0 prediction for beta-arrestin-1 (P29066) · a predicted model of the same protein · chain C against A, TM-score 0.89
  • P08172 · AlphaFold monomer V2.0 prediction for muscarinic acetylcholine receptor M2 (P08172) · a predicted model of the same protein · chain R against A, TM-score 0.86
  • P30518 · AlphaFold monomer V2.0 prediction for vasopressin V2 receptor (P30518) · a predicted model of the same protein · chain R against A, TM-score 0.78

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