MolNFT v1 · #165456 · protein + RNA
Bat influenza a polymerase termination complex with pyrophosphate using 44-mer vrna template with mutated OLIGO(U) sequence
6TW1: “Bat influenza a polymerase termination complex with pyrophosphate using 44-mer vrna template with mutated…”. Electron microscopy, 3 ligands (M4H, POP, MG). MolNFT v1 #165456 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6TW1
- Type
- protein + RNA
- Length
- 2,226 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- H6QM92, H6QM91, H6QM90
- Ligands
- M4H, POP, MG
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 703 | — | H6QM92 |
| B | — | protein | 740 | — | H6QM91 |
| C | — | protein | 740 | — | H6QM90 |
| V | — | rna | 33 | — | — |
| M | — | rna | 10 | — | — |
Ligands and binding sites
- M4H · 5-oxidanyl-4-oxidanylidene-1-[(1-pyrrolo[2,3-b]pyridin-1-ylcyclopentyl)methyl]pyridine-3-carboxylic acid · ligand · chains A
- POP · Pyrophosphate 2- · ligand · chains B, M
- MG · Magnesium ion · metal · 4 copies · chains A, B, M
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TW1 · Bat Influenza A polymerase termination complex with pyrophosphate using 44-mer vRNA… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt H6QM92
- Every structure of UniProt H6QM91
- Every structure of UniProt H6QM90
- Elsewhere: RCSB PDB 6TW1 · PDBe 6TW1 · UniProt H6QM92 · UniProt H6QM91 · UniProt H6QM90
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