Ligand · POP
POP · Pyrophosphate 2-
POP, Pyrophosphate 2- (H2 O7 P2 -2, 176.0 g/mol), in the MolNFT structures on GenesisL1: bound in 174 records (116 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- POP
- Formula
- H2 O7 P2 -2
- Class
- ligand
- Structures
- 174
- PDB entries
- 116
Binding sites
POP in 174 structures; the first of them:
- 4Z74 · Crystal structure of inorganic pyrophosphatase from Mycobacterium tuberculosis in complex… · POP A201 · binds LYS16, ASP29, ARG30, TYR42, ASP57, ASP84, GLU85, ASP89 and 3 more
- 5CUX · Crystal structure of N-terminal domain truncated Trypanosoma cruzi Vacuolar Soluble… · POP A801 · binds VAL208, ARG213, LYS215, LEU219, PRO220, MET221, ASN222, ARG223 and 2 more
- 5EJI · Crystal structure of NAD kinase W78F mutant from Listeria monocytogenes in complex with… · POP A303 · binds LYS8, GLY43, GLY44, ASP45, GLY46, THR47, GLY70, HIS71
- 5F8J · Enterovirus 71 Polymerase Elongation Complex (C1S4 Form) · POP A1007 · binds ARG163, LYS167, ARG174, TYR234, SER235, GLY236, TYR237, ASP238 and 2 more
- 5F8M · Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form) · POP A1005 · binds ARG163, ARG174, TYR234, SER235, GLY236, TYR237, ASP238, ASP329 and 1 more
- 5F8N · Enterovirus 71 Polymerase Elongation Complex (C3S6 Form) · POP A2003 · binds ARG163, ARG174, TYR234, SER235, GLY236, TYR237, ASP329, U702
- 5GG7 · Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP, 8-oxo-dGMP… · POP A403 · binds ARG169, HIS170, ALA173, GLY174, ARG176, ARG186, ARG218, GLU242 and 3 more
- 5GG8 · Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP, 8-oxo-dGMP… · POP A403 · binds ARG169, HIS170, ALA173, GLY174, ARG176, ARG186, ARG218, GLU242 and 3 more
- 5GG9 · Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GTP, 8-oxo-GMP… · POP A403 · binds ARG169, HIS170, ARG176, ARG186, ARG218, GLU242, GLN271, GLY272 and 1 more
- 5GGA · Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GDP, 8-oxo-GMP… · POP A403 · binds ARG169, HIS170, ALA173, ARG176, ARG186, ARG218, GLU242, GLN271 and 2 more
- 5GOZ · Crystal structure of ZIKV NS5 Methyltransferase in complex with GTP and SAH · POP C305 · binds ARG37, ARG41, SER56, ARG57, ARG84
- 5I5G · Crystal Structure of Transketolase mutant-R525L from Pichia Stipitis · POP A701 · binds ALA30, HIS66, LEU116, GLY154, ASP155, GLY156, ASN185, ILE187 and 3 more
- 5IIQ · Structure of the SPX-TTM domain fragment of the yeast inorganic polyphophate polymerase… · POP A503 · binds TYR241, ARG264, ARG266, LYS281, LYS294, SER357, TYR359, ARG361 and 2 more
- 5IMI · Crystal structure of S303A Aspergillus terreus aristolochene synthase complexed with… · POP A401 · binds PHE81, ASP84, ARG169, ASP172, ASN213, SER217, LYS220, GLU221 and 2 more
- 5IMN · Crystal structure of N299A/S303A Aspergillus terreus aristolochene synthase complexed… · POP A401 · binds PHE81, ASP84, ARG169, ASN213, SER217, LYS220, GLU221, ARG308 and 1 more
- 5IMP · Crystal structure of N299A Aspergillus terreus aristolochene synthase complexed with… · POP A401 · binds PHE81, ASP84, ARG169, ASP172, ASN213, SER217, LYS220, GLU221 and 2 more
- 5IN8 · Crystal structure of Q151H Aspergillus terreus aristolochene synthase · POP B401 · binds PHE81, HIS151, ARG169, ASN213, SER217, LYS220, GLU221, ARG308 and 1 more
Residues it binds most
ARG 255, LYS 210, ASP 200, TYR 122, GLY 125, SER 108, ASN 108, GLU 78, PHE 64, THR 63 (residue and the binding sites it lines).
Found with
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