MolNFT v1 · #162723 · protein
Fragment az-003 binding at the TAZPS89/14-3-3 sigma interface
6RHC · 14-3-3 protein sigma: “Fragment az-003 binding at the TAZPS89/14-3-3 sigma interface”. X-ray diffraction, 3 ligands (K48, MG, CL). MolNFT v1 #162723 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RHC
- Type
- protein
- Length
- 240 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 14-3-3 protein sigma; Ww domain-containing transcription regulator protein 1
- UniProt
- P31947, Q9GZV5
- Ligands
- K48, MG, CL
Structure
x-ray diffraction · 2 distinct chains · 80% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 14-3-3 protein sigma | protein | 227 | 84% helix, 0% strand | P31947 |
| P | Ww domain-containing transcription regulator protein 1 | protein | 13 | 0% helix, 0% strand | Q9GZV5 |
Ligands and binding sites
- K48 · 5-azanyl-4-phenyl-thiophene-2-carboximidamide · ligand · chains A, P
- MG · Magnesium ion · metal · 3 copies · chains A, P
- CL · Chloride ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–P · 858 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 modified (phosphorylation).
Compared structures
- 6RHC · Fragment AZ-003 binding at the TAZpS89/14-3-3 sigma interface · the same entry in another collection · chain A against A, TM-score 1.00
- P31947 · AlphaFold monomer V2.0 prediction for 14-3-3 protein sigma (P31947) · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q9GZV5 · AlphaFold monomer V2.0 prediction for ww domain-containing transcription regulator… · a predicted model of the same protein · chain P against A, TM-score 0.30
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31947
- Every structure of UniProt Q9GZV5
- Elsewhere: RCSB PDB 6RHC · PDBe 6RHC · UniProt P31947 · UniProt Q9GZV5
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