MolNFT v1 · #162201 · protein + DNA
Structure of LSD2/NPAC-LINKER/NUCLEOSOME core particle complex: class 2
6R1U: “Structure of LSD2/NPAC-LINKER/NUCLEOSOME core particle complex: class 2”. Electron microscopy, 2 ligands (FAD, ZN). MolNFT v1 #162201 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6R1U
- Type
- protein + DNA
- Length
- 1,844 residues
- Chains
- 13
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P84233, P62799, Q6AZJ8, P02281, Q8NB78, Q49A26, A0A310TTQ1
- Ligands
- FAD, ZN
Structure
electron microscopy · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 99 | — | P84233 |
| B | — | protein | 85 | — | P62799 |
| C | — | protein | 105 | — | Q6AZJ8 |
| D | — | protein | 96 | — | P02281 |
| E | — | protein | 99 | — | P84233 |
| F | — | protein | 80 | — | P62799 |
| G | — | protein | 113 | — | Q6AZJ8 |
| H | — | protein | 98 | — | P02281 |
| I | — | dna | 147 | — | — |
| J | — | dna | 147 | — | — |
| K | — | protein | 737 | — | Q8NB78 |
| L | — | protein | 12 | — | Q49A26 |
| M | — | protein | 26 | — | A0A310TTQ1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6R1U · Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2 · the same entry in another collection · chain M against M, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P84233
- Every structure of UniProt P62799
- Every structure of UniProt Q6AZJ8
- Every structure of UniProt P02281
- Every structure of UniProt Q8NB78
- Every structure of UniProt Q49A26
- Every structure of UniProt A0A310TTQ1
- Elsewhere: RCSB PDB 6R1U · PDBe 6R1U · UniProt P84233 · UniProt P62799 · UniProt Q6AZJ8 · UniProt P02281 · UniProt Q8NB78 · UniProt Q49A26 · UniProt A0A310TTQ1
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