MolNFT v1 · #162083 · protein + DNA
Segment of the CAS1-CAS2-CSN2-DNA filament complex from the type II-a CRISPR-CAS system
6QY3: “Segment of the CAS1-CAS2-CSN2-DNA filament complex from the type II-a CRISPR-CAS system”. Electron microscopy, 1 ligand (CA). MolNFT v1 #162083 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6QY3
- Type
- protein + DNA
- Length
- 10,648 residues
- Chains
- 54
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G3ECR4, G3ECR2, G3ECR3
- Ligands
- CA
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G, a, c, e, g | — | protein | 218 | — | G3ECR4 |
| B, D, F, H, b, d, f, h | — | protein | 219 | — | G3ECR4 |
| I, J, L, M, O, P, R, S, U, V, Y, Z, i, j, l, m, o, p, r, s, u, v, y, z | — | protein | 287 | — | G3ECR2 |
| K, N, Q, T, W, X, k, n, q, t, w, x | — | protein | 11 | — | G3ECR3 |
| 1 | — | dna | 66 | — | — |
| 2 | — | dna | 66 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 16 copies · chains A, D, B, C, E, H, F, G, a, d, b, c, e, h, f, g
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6QY3 · Segment of the Cas1-Cas2-Csn2-DNA filament complex from the Type II-A CRISPR-Cas system · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G3ECR4
- Every structure of UniProt G3ECR2
- Every structure of UniProt G3ECR3
- Elsewhere: RCSB PDB 6QY3 · PDBe 6QY3 · UniProt G3ECR4 · UniProt G3ECR2 · UniProt G3ECR3
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