MolNFT v1 · #157494 · protein
Crystal structure of an N-acetylgalactosamine deacetylase from F. plautii in complex with blood group B trisaccharide
6N1B: “Crystal structure of an N-acetylgalactosamine deacetylase from F. plautii in complex with blood group B…”. X-ray diffraction, 4 ligands (GAL, FUC, GLA). MolNFT v1 #157494 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N1B
- Type
- protein
- Length
- 385 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1C7FP65
- Ligands
- GAL, FUC, GLA, CA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 385 | — | A0A1C7FP65 |
Ligands and binding sites
- GAL · beta-D-galactopyranose · sugar · chains A
- FUC · alpha-L-fucopyranose · sugar · chains A
- GLA · alpha-D-galactopyranose · sugar · chains A
- CA · Calcium ion · metal · 4 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6N1B · Crystal structure of an N-acetylgalactosamine deacetylase from F. plautii in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1C7FP65
- Elsewhere: RCSB PDB 6N1B · PDBe 6N1B · UniProt A0A1C7FP65
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