MolNFT v1 · #157488 · protein
UBCH7-ub complex with R0RBR parkin and phosphoubiquitin
6N13: “UBCH7-ub complex with R0RBR parkin and phosphoubiquitin”. Solution nmr, 1 ligand (ZN). MolNFT v1 #157488 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N13
- Type
- protein
- Length
- 628 residues
- Chains
- 4
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O60260, P0CG47, P68036
- Ligands
- ZN
Structure
solution nmr · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 322 | — | O60260 |
| D, A | — | protein | 76 | — | P0CG47 |
| C | — | protein | 154 | — | P68036 |
Ligands and binding sites
- ZN · Zinc ion · metal · 8 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6N13 · UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin · the same entry in another collection · chain B against B, TM-score 1.00
- P68036 · AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 L3 (P68036) · a predicted model of the same protein · chain C against A, TM-score 0.98
- O60260 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase parkin (O60260) · a predicted model of the same protein · chain B against A, TM-score 0.77
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60260
- Every structure of UniProt P0CG47
- Every structure of UniProt P68036
- Elsewhere: RCSB PDB 6N13 · PDBe 6N13 · UniProt O60260 · UniProt P0CG47 · UniProt P68036
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