MolNFT v1 · #153183 · protein
Crystal structure of thymidylate synthase, THY1, from thermus thermophilus having an extra C terminal domain
6J61: “Crystal structure of thymidylate synthase, THY1, from thermus thermophilus having an extra C terminal domain”. X-ray diffraction, 2 ligands (FAD, PO4). MolNFT v1 #153183 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6J61
- Type
- protein
- Length
- 963 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5SJB8
- Ligands
- FAD, PO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 242 | — | Q5SJB8 |
| B | — | protein | 239 | — | Q5SJB8 |
| C | — | protein | 240 | — | Q5SJB8 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · 4 copies · chains A, B, D, C
- PO4 · Phosphate ion · ion · 8 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6J61 · Crystal Structure of Thymidylate Synthase, Thy1, from Thermus thermophilus having an… · the same entry in another collection · chain A against A, TM-score 1.00
- Q5SJB8 · AlphaFold monomer V2.0 prediction for flavin-dependent thymidylate synthase (Q5SJB8) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SJB8
- Elsewhere: RCSB PDB 6J61 · PDBe 6J61 · UniProt Q5SJB8
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