MolNFT v1 · #150482 · protein
Room temperature structure of archaerhodopsin-3 via lcp extruder using synchrotron radiation
6GUY: “Room temperature structure of archaerhodopsin-3 via lcp extruder using synchrotron radiation”. X-ray diffraction, 5 ligands (R16, RET, CA). MolNFT v1 #150482 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GUY
- Type
- protein
- Length
- 241 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P96787
- Ligands
- R16, RET, CA, NA, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 241 | — | P96787 |
Ligands and binding sites
- R16 · Hexadecane · ligand · 5 copies · chains A
- RET · Retinal · ligand · chains A
- CA · Calcium ion · metal · chains A
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · 3 copies · chains A
- DD9 · nonane · additive · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GUY · Room temperature structure of Archaerhodopsin-3 via LCP extruder using synchrotron… · the same entry in another collection · chain A against A, TM-score 1.00
- P96787 · AlphaFold monomer V2.0 prediction for archaerhodopsin-3 (P96787) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P96787
- Elsewhere: RCSB PDB 6GUY · PDBe 6GUY · UniProt P96787
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