Ligand · RET
RET · Retinal
RET, Retinal (C20 H28 O, 284.4 g/mol), in the MolNFT structures on GenesisL1: bound in 369 records (255 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- RET
- Formula
- C20 H28 O
- Class
- ligand
- Structures
- 369
- PDB entries
- 255
Binding sites
RET in 369 structures; the first of them:
- 4WW3 · Crystal structure of the lumi intermediate of squid rhodopsin · RET A401 · binds ASN87, TYR111, GLY112, GLY115, GLY116, GLY119, PHE120, ILE123 and 13 more
- 4YZI · Crystal structure of blue-shifted channelrhodopsin mutant (T198G/G202A) · RET A401 · binds TRP163, THR166, CYS167, ILE170, GLY198, ALA202, PHE217, GLY220 and 9 more
- 5A44 · Structure of Bacteriorhodopsin obtained from 20um crystals by multi crystal data… · RET A1229 · binds TYR83, TRP86, THR89, THR90, LEU93, MET118, GLY122, TRP138 and 10 more
- 5AHY · Halorhodopsin from Halobacterium salinarum in a new rhombohedral crystal form · RET A900 · binds TYR109, TRP112, SER115, THR116, ILE119, MET144, GLY148, TYR165 and 10 more
- 5B0W · Crystal structure of the 11-cis isomer of pharaonis halorhodopsin in the absence of… · RET A301 · binds TYR124, TRP127, SER130, THR131, MET159, CYS160, GLY163, TYR180 and 26 more
- 5B6V · A three dimensional movie of structural changes in bacteriorhodopsin: resting state… · RET A300 · binds TYR83, TRP86, THR89, THR90, LEU93, MET118, ILE119, GLY122 and 11 more
- 5B6W · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · RET A300 · binds TYR83, TRP86, THR89, THR90, LEU93, MET118, ILE119, GLY122 and 11 more
- 5B6Y · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · RET A300 · binds TYR83, TRP86, THR89, THR90, LEU93, MET118, ILE119, GLY122 and 11 more
- 5DYS · Crystal Structure of T94I rhodopsin mutant · RET A401 · binds MET86, ALA117, GLU122, MET207, PHE208, HIS211, TRP265, TYR268 and 3 more
- 5EN0 · Crystal Structure of T94I rhodopsin mutant · RET A401 · binds ALA117, GLU122, MET207, PHE208, HIS211, PHE212, TRP265, TYR268 and 3 more
- 5ETZ · Structure of the all-trans isomer of pharaonis halorhodopsin in the absence of halide ions · RET A301 · binds TYR124, TRP127, SER130, THR131, MET159, GLY163, TYR180, SER183 and 8 more
- 5F58 · Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding… · RET A201 · binds PHE16, TYR19, MET20, ALA33, GLN38, VAL51, THR53, PHE58 and 6 more
- 5F6B · Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol… · RET A201 · binds PHE16, TRP19, ALA33, GLN38, THR53, SER55, TYR58, TYR60 and 4 more
- 5F7G · Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W:Q38L mutant of human Cellular Retinol… · RET A201 · binds PHE16, TRP19, MET20, ILE25, ALA33, LEU38, LEU40, VAL51 and 8 more
- 5FAZ · Crystal structure of the Q108K:K40L:T51V mutant of human Cellular Retinol Binding Protein… · RET A202 · binds PHE16, MET20, ALA33, GLN38, LEU40, VAL51, THR53, PHE57 and 8 more
- 5FEN · Crystal structure of the Q108K:K40L:T53C mutant of human Cellular Retinol Binding Protein… · RET A201 · binds PHE16, TYR19, MET20, THR51, CYS53, TYR60, VAL62, LEU77 and 3 more
- 5FFH · Crystal structure of the Q108K:K40L:T51V:R58W:Y19W mutant of human Cellular Retinol… · RET A202 · binds PHE16, TRP19, MET20, ALA33, THR53, SER55, TRP58, TYR60 and 4 more
- 5G2A · The crystal structure of light-driven chloride pump ClR at pH 6.0 with Bromide ion. · RET A1268 · binds TYR96, TRP99, THR102, ILE103, LEU106, MET135, ILE136, GLY139 and 11 more
- 5G2C · The crystal structure of light-driven chloride pump ClR (T102D) mutant at pH 4.5. · RET A1273 · binds TRP99, ASP102, ILE103, LEU106, MET135, GLY139, SER160, THR161 and 7 more
- 5G2D · The crystal structure of light-driven chloride pump ClR (T102N) mutant at pH 4.5. · RET A1274 · binds TRP99, ILE103, LEU106, MET135, GLY139, GLY157, SER160, THR161 and 7 more
- 5G36 · Yellow form of Halorhodopsin from Halobacterium salinarum in a new rhombohedral crystal… · RET A1262 · binds TRP112, THR116, MET144, GLY148, TYR165, SER168, CYS169, PHE172 and 6 more
- 5G54 · The crystal structure of light-driven chloride pump ClR at pH 4.5 · RET A1277 · binds TYR96, TRP99, ILE103, LEU106, MET135, ILE136, GLY139, GLY157 and 10 more
- 5H2H · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · RET A300 · binds TRP86, THR90, LEU93, MET118, TRP138, SER141, THR142, TRP182 and 5 more
- 5H2I · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · RET A300 · binds TRP86, THR90, LEU93, MET118, TRP138, SER141, THR142, TRP182 and 5 more
- 5H2J · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · RET A300 · binds TYR83, TRP86, THR89, THR90, LEU93, MET118, ILE119, GLY122 and 11 more
- 5H2K · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · RET A300 · binds TYR83, TRP86, THR89, THR90, LEU93, MET118, ILE119, GLY122 and 11 more
Residues it binds most
TRP 603, TYR 570, SER 499, GLY 444, THR 410, LEU 478, MET 505, LYS 605, PHE 468, ASP 410 (residue and the binding sites it lines).
Found with
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.