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Ligand · C14

C14 · Tetradecane

C14, Tetradecane (C14 H30, 198.4 g/mol), in the MolNFT structures on GenesisL1: bound in 74 records (64 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
C14
Formula
C14 H30
Class
ligand
Structures
74
PDB entries
64

Binding sites

C14 in 74 structures; the first of them:

  • 5B6W · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PHE88, PRO91, LEU92, LEU95, ILE108, VAL112
  • 5H2H · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PRO91, LEU95, ILE108
  • 5H2I · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PRO91, LEU95, ILE108
  • 5H2J · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PHE88, PRO91, LEU92, LEU95, ILE108, VAL112
  • 5H2L · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PRO91, LEU95, ILE108
  • 5H2N · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PRO91, LEU95, ILE108
  • 5H2O · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A612 · binds LEU87, PRO91, LEU95, ILE108
  • 5H2P · A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained… · C14 A314 · binds LEU87, PRO91, LEU95, ILE108
  • 5I75 · X-ray structure of the ts3 human serotonin transporter complexed with s-citalopram at the… · C14 A704 · binds THR503, TYR579, THR583, PHE586
  • 6GA3 · Bacteriorhodopsin, 33 ms state, ensemble refinement · C14 A313 · binds LEU87, PHE88, PRO91, LEU92, LEU95, ILE108, VAL112
  • 6GA5 · Bacteriorhodopsin, 3 ps state, REAL-SPACE REFINEMED AGAINST 10% EXTRAPOLATED MAP · C14 A313 · binds LEU87, PHE88, PRO91, LEU92, LEU95, ILE108, VAL112
  • 6GA7 · Bacteriorhodopsin, 240FS state, real-space refined against 10% extrapolated MAP · C14 A313 · binds LEU87, PRO91, LEU95, ILE108
  • 6GAC · Bacteriorhodopsin, 490 fs state, real-space refined against 15% extrapolated structure… · C14 A313 · binds LEU87, PHE88, PRO91, LEU92, LEU95, ILE108, VAL112
  • 6GAF · Bacteriorhodopsin, 590 fs state, real-space refined against 15% extrapolated structure… · C14 A313 · binds LEU87, PRO91, LEU95, ILE108
  • 6LM0 · The crystal structure of cyanorhodopsin (CyR) N2098R from cyanobacteria Calothrix sp.… · C14 A307 · binds GLY99, ALA103, ILE128, GLY131, SER132, ALA135, SER139, PHE40 and 2 more
  • 6ZOC · Erythromycin binding to the access pocket of AcrB-G616P L protomer and 3-formylrifamycin… · C14 A1201 · binds ILE27, LEU28, HIS338, VAL341, PHE380, ILE390
  • 6ZOG · Minocycline binding to the deep binding pocket of AcrB-I38F_I671T · C14 C1305 · binds PHE458, PHE459, GLY460
  • 7SK1 · TWIK1 in MSP1E3D1 Lipid Nanodisc at pH 5.5 · C14 A405 · binds LEU149, LEU257, MET260, VAL139
  • 7VGV · Anion free form of light-driven chloride ion-pumping rhodopsin, NM-R3, structure… · C14 A306 · binds PHE194, TRP195, MET198
  • 7XE4 · structure of a membrane-bound glycosyltransferase · C14 F1914 · binds PHE685, GLN1309, MET1310, ARG1455, PRO1567, TYR1571
  • 7XQB · Structure of connexin43/Cx43/GJA1 gap junction intercellular channel in POPE/CHS… · C14 A401 · binds PHE77

Residues it binds most

PHE 428, LEU 292, ILE 292, VAL 196, THR 164, TRP 125, PRO 133, GLY 107, SER 108, ALA 76 (residue and the binding sites it lines).

Found with

  • OCT · N-octane
  • D10 · Decane
  • HP6 · Heptane
  • RET · Retinal
  • DD9 · nonane
  • MYS · Pentadecane
  • UND · Undecane
  • L2P · 2,3-di-phytanyl-glycerol
  • TRD · Tridecane
  • D12 · Dodecane
  • HEX · Hexane
  • LMT · Dodecyl-beta-D-maltoside

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