GL1X · GenesisL1 explorer

MolNFT v1 · #150453 · protein

CDK1/CYCLINB/CKS2 in complex with AZD5438

6GU3: “CDK1/CYCLINB/CKS2 in complex with AZD5438”. X-ray diffraction, 1 ligand (FB8). MolNFT v1 #150453 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6GU3
Type
protein
Length
630 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P06493, P14635, P33552
Ligands
FB8

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein292—P06493
B—protein264—P14635
C—protein74—P33552

Ligands and binding sites

  • FB8 · 4-(2-methyl-3-propan-2-yl-imidazol-4-yl)-~{N}-(4-methylsulfonylphenyl)pyrimidin-2-amine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GU3 · CDK1/CyclinB/Cks2 in complex with AZD5438 · the same entry in another collection · chain A against A, TM-score 1.00
  • P14635 · AlphaFold monomer V2.0 prediction for G2/MITOTIC-specific cyclin-B1 (P14635) · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P33552 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinases regulatory subunit 2… · a predicted model of the same protein · chain C against A, TM-score 0.94
  • P06493 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinase 1 (P06493) · a predicted model of the same protein · chain A against A, TM-score 0.93

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