MolNFT v1 · #149889 · protein
Cryo-EM structure of the adenosine A2A receptor bound to a minigs heterotrimer
6GDG: “Cryo-EM structure of the adenosine A2A receptor bound to a minigs heterotrimer”. Electron microscopy, 1 ligand (NEC). MolNFT v1 #149889 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GDG
- Type
- protein
- Length
- 997 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q14F07, P29274, P62873, P59768, P63092
- Ligands
- NEC
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 264 | — | Q14F07, P29274 |
| B | — | protein | 336 | — | P62873 |
| C | — | protein | 44 | — | P59768 |
| D | — | protein | 225 | — | P63092 |
| E | — | protein | 128 | — | — |
Ligands and binding sites
- NEC · N-ethyl-5'-carboxamido adenosine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GDG · Cryo-EM structure of the adenosine A2A receptor bound to a miniGs heterotrimer · the same entry in another collection · chain E against E, TM-score 1.00
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P29274 · AlphaFold monomer V2.0 prediction for adenosine receptor A2A (P29274) · a predicted model of the same protein · chain A against A, TM-score 0.91
- P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.87
- P63092 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(S) subunit… · a predicted model of the same protein · chain D against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14F07
- Every structure of UniProt P29274
- Every structure of UniProt P62873
- Every structure of UniProt P59768
- Every structure of UniProt P63092
- Elsewhere: RCSB PDB 6GDG · PDBe 6GDG · UniProt Q14F07 · UniProt P29274 · UniProt P62873 · UniProt P59768 · UniProt P63092
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