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MolNFT v1 · #149889 · protein

Cryo-EM structure of the adenosine A2A receptor bound to a minigs heterotrimer

6GDG: “Cryo-EM structure of the adenosine A2A receptor bound to a minigs heterotrimer”. Electron microscopy, 1 ligand (NEC). MolNFT v1 #149889 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6GDG
Type
protein
Length
997 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q14F07, P29274, P62873, P59768, P63092
Ligands
NEC

Structure

electron microscopy · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein264—Q14F07, P29274
B—protein336—P62873
C—protein44—P59768
D—protein225—P63092
E—protein128——

Ligands and binding sites

  • NEC · N-ethyl-5'-carboxamido adenosine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GDG · Cryo-EM structure of the adenosine A2A receptor bound to a miniGs heterotrimer · the same entry in another collection · chain E against E, TM-score 1.00
  • P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P29274 · AlphaFold monomer V2.0 prediction for adenosine receptor A2A (P29274) · a predicted model of the same protein · chain A against A, TM-score 0.91
  • P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.87
  • P63092 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(S) subunit… · a predicted model of the same protein · chain D against A, TM-score 0.86

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