MolNFT v1 · #149030 · protein
Cryoem structure of bovine cytochrome BC1 in complex with the anti- malarial compound GSK932121
6FO0: “Cryoem structure of bovine cytochrome BC1 in complex with the anti- malarial compound GSK932121”. Electron microscopy, 3 ligands (HEM, G8U, HEC). MolNFT v1 #149030 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FO0
- Type
- protein
- Length
- 3,910 residues
- Chains
- 20
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P31800, P23004, P00157, P00125, P13272, P00129, P13271, P00126, P00130
- Ligands
- HEM, G8U, HEC
Structure
electron microscopy · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| N, A | — | protein | 443 | — | P31800 |
| O, B | — | protein | 414 | — | P23004 |
| P, C | — | protein | 370 | — | P00157 |
| Q, D | — | protein | 239 | — | P00125 |
| R, E | — | protein | 178 | — | P13272 |
| S, F | — | protein | 98 | — | P00129 |
| T, G | — | protein | 74 | — | P13271 |
| U, H | — | protein | 65 | — | P00126 |
| V, I | — | protein | 17 | — | — |
| W, J | — | protein | 57 | — | P00130 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains P, C
- G8U · 3-chloro-6-(hydroxymethyl)-2-methyl-5-{4-[3-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-ol · ligand · 2 copies · chains P, C
- HEC · Heme C · ligand · 2 copies · chains Q, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FO0 · CryoEM structure of bovine cytochrome bc1 in complex with the anti-malarial compound… · the same entry in another collection · chain W against W, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31800
- Every structure of UniProt P23004
- Every structure of UniProt P00157
- Every structure of UniProt P00125
- Every structure of UniProt P13272
- Every structure of UniProt P00129
- Every structure of UniProt P13271
- Every structure of UniProt P00126
- Every structure of UniProt P00130
- Elsewhere: RCSB PDB 6FO0 · PDBe 6FO0 · UniProt P31800 · UniProt P23004 · UniProt P00157 · UniProt P00125 · UniProt P13272 · UniProt P00129 · UniProt P13271 · UniProt P00126 · UniProt P00130
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