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MolNFT v1 · #148064 · protein

Cryo-EM structure of gmpcpp-microtubule co-polymerised with doublecortin

6EVW: “Cryo-EM structure of gmpcpp-microtubule co-polymerised with doublecortin”. Electron microscopy, 3 ligands (GTP, G2P, MG). MolNFT v1 #148064 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6EVW
Type
protein
Length
5,112 residues
Chains
12
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q2XVP4, P02554
Ligands
GTP, G2P, MG

Structure

electron microscopy · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
E, J, C, L, A, K—protein423—Q2XVP4
B, F, G, D, I, H—protein429—P02554

Ligands and binding sites

  • GTP · Guanosine-5'-triphosphate · ligand · 6 copies · chains E, J, C, L, A, H, K
  • G2P · Phosphomethylphosphonic acid guanylate ester · ligand · 6 copies · chains A, B, E, F, G, C, D, I, H
  • MG · Magnesium ion · metal · 12 copies · chains E, J, C, L, A, K, B, F, G, D, I, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6EVW · Cryo-EM structure of GMPCPP-microtubule co-polymerised with doublecortin · the same entry in another collection · chain E against E, TM-score 1.00

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