MolNFT v1 · #146972 · protein

Vanadyl-bound structure of the engineered cyt CB562 variant, CH3Y

6DYH: “Vanadyl-bound structure of the engineered cyt CB562 variant, CH3Y”. X-ray diffraction, 2 ligands (HEC, V). MolNFT v1 #146972 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6DYH
Type: protein
Length: 212 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0ABE7
Ligands: HEC, V

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, D	—	protein	106	—	P0ABE7

Ligands and binding sites

HEC · Heme C · ligand · 2 copies · chains A, D
V · Vanadium ion · metal · chains A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6DYH · Vanadyl-bound structure of the engineered cyt cb562 variant, CH3Y · the same entry in another collection · chain A against A, TM-score 1.00
P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain D against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0ABE7
Elsewhere: RCSB PDB 6DYH · PDBe 6DYH · UniProt P0ABE7

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.