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MolNFT v1 · #146780 · protein

Structural determinants of activation and biased agonism at the 5-HT2B receptor

6DS0: “Structural determinants of activation and biased agonism at the 5-HT2B receptor”. X-ray diffraction, 2 ligands (CLR, H8M). MolNFT v1 #146780 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6DS0
Type
protein
Length
368 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P41595, P0ABE7
Ligands
CLR, H8M

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein368—P41595, P0ABE7

Ligands and binding sites

  • CLR · Cholesterol · ligand · chains A
  • H8M · (1S)-1-[(2-chloro-3,4-dimethoxyphenyl)methyl]-6-methyl-2,3,4,9-tetrahydro-1H-beta-carboline · ligand · chains A
  • OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · chains A
  • PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6DS0 · Structural Determinants of Activation and Biased Agonism at the 5-HT2B Receptor · the same entry in another collection · chain A against A, TM-score 1.00
  • P41595 · AlphaFold monomer V2.0 prediction for 5-hydroxytryptamine receptor 2B (P41595) · a predicted model of the same protein · chain A against A, TM-score 0.82
  • P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.24

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