MolNFT v1 · #146441 · protein
Bovine glutamate dehydrogenase complexed with zinc
6DHM: “Bovine glutamate dehydrogenase complexed with zinc”. X-ray diffraction, 3 ligands (NDP, GTP, ZN). MolNFT v1 #146441 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DHM
- Type
- protein
- Length
- 2,982 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A140T871
- Ligands
- NDP, GTP, ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E | — | protein | 496 | — | A0A140T871 |
| F | — | protein | 502 | — | A0A140T871 |
Ligands and binding sites
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 6 copies · chains A, B, C, D, E, F
- GTP · Guanosine-5'-triphosphate · ligand · 6 copies · chains A, B, C, D, E, F
- ZN · Zinc ion · metal · 12 copies · chains A, D, B, E, C, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DHM · Bovine glutamate dehydrogenase complexed with zinc · the same entry in another collection · chain F against F, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A140T871
- Elsewhere: RCSB PDB 6DHM · PDBe 6DHM · UniProt A0A140T871
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