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MolNFT v1 · #146434 · protein

Crystal structure of the human tim-3 with bound calcium

6DHB: “Crystal structure of the human tim-3 with bound calcium”. X-ray diffraction, 2 ligands (BEZ, CA). MolNFT v1 #146434 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6DHB
Type
protein
Length
108 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8TDQ0
Ligands
BEZ, CA

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein108—Q8TDQ0

Ligands and binding sites

  • BEZ · Benzoic acid · ligand · chains A
  • CA · Calcium ion · metal · chains A
  • EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6DHB · Crystal structure of the human TIM-3 with bound Calcium · the same entry in another collection · chain A against A, TM-score 1.00
  • Q8TDQ0 · AlphaFold monomer V2.0 prediction for hepatitis a virus cellular receptor 2 (Q8TDQ0) · a predicted model of the same protein · chain A against A, TM-score 0.95

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