MolNFT v1 · #140959 · protein
Crystal structure of the second starkin domain of LAM2 in complex with ergosterol
5YS0: “Crystal structure of the second starkin domain of LAM2 in complex with ergosterol”. X-ray diffraction, 1 ligand (ERG). MolNFT v1 #140959 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YS0
- Type
- protein
- Length
- 472 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q06681
- Ligands
- ERG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 160 | — | Q06681 |
| B | — | protein | 164 | — | Q06681 |
| C | — | protein | 148 | — | Q06681 |
Ligands and binding sites
- ERG · Ergosterol · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YS0 · Crystal structure of the second StARkin domain of Lam2 in complex with ergosterol · the same entry in another collection · chain A against A, TM-score 1.00
- Q06681 · AlphaFold monomer V2.0 prediction for membrane-anchored lipid-binding protein YSP2… · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06681
- Elsewhere: RCSB PDB 5YS0 · PDBe 5YS0 · UniProt Q06681
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.