MolNFT v2 · #141830 · protein
Crystal structure of the second StARkin domain of Lam2 in complex with ergosterol
5YS0: “Crystal structure of the second StARkin domain of Lam2 in complex with ergosterol”. X-ray diffraction at 2.601, 1 ligand (ERG). MolNFT v2 #141830 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YS0
- Type
- protein
- Length
- 472 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.601
- Source
- Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
- UniProt
- Q06681
- Ligands
- ERG
Structure
x-ray diffraction · resolution 2.601 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 160 | — | Q06681 |
| B | — | protein | 164 | — | Q06681 |
| C | — | protein | 148 | — | Q06681 |
Ligands and binding sites
- ERG · Ergosterol · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YS0 · Crystal structure of the second starkin domain of LAM2 in complex with ergosterol · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06681
- Elsewhere: RCSB PDB 5YS0 · PDBe 5YS0 · UniProt Q06681
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