MolNFT v1 · #139734 · protein

Crystal structure of XPO1P-pki-NUP42P-GSP1P-GTP complex

5XOJ: “Crystal structure of XPO1P-pki-NUP42P-GSP1P-GTP complex”. X-ray diffraction, 2 ligands (GTP, MG). MolNFT v1 #139734 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5XOJ
Type: protein
Length: 1,212 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: E7KFU1, P30822, P61925, E7Q297
Ligands: GTP, MG

Structure

x-ray diffraction · 6 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	170	—	E7KFU1
C	—	protein	999	—	P30822
D	—	protein	19	—	P61925
E	—	protein	7	—	E7Q297
F	—	protein	9	—	E7Q297
G	—	protein	8	—	E7Q297

Ligands and binding sites

GTP · Guanosine-5'-triphosphate · ligand · chains A
MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5XOJ · Crystal structure of Xpo1p-PKI-Nup42p-Gsp1p-GTP complex · the same entry in another collection · chain D against D, TM-score 1.00
P30822 · AlphaFold monomer V2.0 prediction for exportin-1 (P30822) · a predicted model of the same protein · chain C against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt E7KFU1
Every structure of UniProt P30822
Every structure of UniProt P61925
Every structure of UniProt E7Q297
Elsewhere: RCSB PDB 5XOJ · PDBe 5XOJ · UniProt E7KFU1 · UniProt P30822 · UniProt P61925 · UniProt E7Q297

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