MolNFT v1 · #139149 · protein + DNA
Crystal structure of SMAD5-MH1/GC-bre DNA complex
5X6H: “Crystal structure of SMAD5-MH1/GC-bre DNA complex”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #139149 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5X6H
- Type
- protein + DNA
- Length
- 129 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P97454
- Ligands
- ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 115 | — | P97454 |
| E | — | dna | 14 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X6H · Crystal Structure of SMAD5-MH1/GC-BRE DNA complex · the same entry in another collection · chain B against B, TM-score 1.00
- P97454 · AlphaFold monomer V2.0 prediction for mothers against decapentaplegic homolog 5 (P97454) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P97454
- Elsewhere: RCSB PDB 5X6H · PDBe 5X6H · UniProt P97454
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