MolNFT v2 · #140012 · protein + DNA
Crystal Structure of SMAD5-MH1/GC-BRE DNA complex
5X6H: “Crystal Structure of SMAD5-MH1/GC-BRE DNA complex”. X-ray diffraction at 3.1, 1 ligand (ZN). MolNFT v2 #140012 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5X6H
- Type
- protein + DNA
- Length
- 129 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.1
- Source
- Mus musculus; SYNTHETIC CONSTRUCT
- UniProt
- P97454
- Ligands
- ZN
Structure
x-ray diffraction · resolution 3.1 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 115 | — | P97454 |
| E | — | dna | 14 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X6H · Crystal structure of SMAD5-MH1/GC-bre DNA complex · the same entry in another collection · chain B against B, TM-score 1.00
- P97454 · AlphaFold monomer V2.0 prediction for mothers against decapentaplegic homolog 5 (P97454) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P97454
- Elsewhere: RCSB PDB 5X6H · PDBe 5X6H · UniProt P97454
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