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MolNFT v1 · #136170 · protein

Bovine GRK2 in complex with human gbetagamma subunits and CCG258208 (14AS)

5UKM: “Bovine GRK2 in complex with human gbetagamma subunits and CCG258208 (14AS)”. X-ray diffraction, 2 ligands (T0E, MG). MolNFT v1 #136170 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5UKM
Type
protein
Length
1,021 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P21146, P62873, P59768
Ligands
T0E, MG

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein621—P21146
B—protein339—P62873
G—protein61—P59768

Ligands and binding sites

  • T0E · 5-[(3S,4R)-3-{[(2H-1,3-benzodioxol-5-yl) oxy]methyl}piperidin-4-yl]-2-fluoro-N-[(1H-pyrazol-5-yl)methyl]benzamide · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5UKM · bovine GRK2 in complex with human Gbetagamma subunits and CCG258208 (14as) · the same entry in another collection · chain A against A, TM-score 1.00
  • P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P21146 · AlphaFold monomer V2.0 prediction for beta-adrenergic receptor kinase 1 (P21146) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.85

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