MolNFT v1 · #136170 · protein
Bovine GRK2 in complex with human gbetagamma subunits and CCG258208 (14AS)
5UKM: “Bovine GRK2 in complex with human gbetagamma subunits and CCG258208 (14AS)”. X-ray diffraction, 2 ligands (T0E, MG). MolNFT v1 #136170 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UKM
- Type
- protein
- Length
- 1,021 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P21146, P62873, P59768
- Ligands
- T0E, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 621 | — | P21146 |
| B | — | protein | 339 | — | P62873 |
| G | — | protein | 61 | — | P59768 |
Ligands and binding sites
- T0E · 5-[(3S,4R)-3-{[(2H-1,3-benzodioxol-5-yl) oxy]methyl}piperidin-4-yl]-2-fluoro-N-[(1H-pyrazol-5-yl)methyl]benzamide · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UKM · bovine GRK2 in complex with human Gbetagamma subunits and CCG258208 (14as) · the same entry in another collection · chain A against A, TM-score 1.00
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P21146 · AlphaFold monomer V2.0 prediction for beta-adrenergic receptor kinase 1 (P21146) · a predicted model of the same protein · chain A against A, TM-score 0.98
- P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21146
- Every structure of UniProt P62873
- Every structure of UniProt P59768
- Elsewhere: RCSB PDB 5UKM · PDBe 5UKM · UniProt P21146 · UniProt P62873 · UniProt P59768
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