MolNFT v1 · #135663 · protein
12 subunit RNA polymerase II at room temperature collected using sfx
5U5Q: “12 subunit RNA polymerase II at room temperature collected using sfx”. X-ray diffraction, 2 ligands (ZN, MG). MolNFT v1 #135663 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U5Q
- Type
- protein
- Length
- 3,988 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04050, P08518, P16370, P20433, P20434, P20435, P34087, P20436, P27999, P22139, P38902, P40422
- Ligands
- ZN, MG
Structure
x-ray diffraction · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1434 | — | P04050 |
| B | — | protein | 1150 | — | P08518 |
| C | — | protein | 266 | — | P16370 |
| D | — | protein | 184 | — | P20433 |
| E | — | protein | 215 | — | P20434 |
| F | — | protein | 87 | — | P20435 |
| G | — | protein | 171 | — | P34087 |
| H | — | protein | 137 | — | P20436 |
| I | — | protein | 119 | — | P27999 |
| J | — | protein | 65 | — | P22139 |
| K | — | protein | 114 | — | P38902 |
| L | — | protein | 46 | — | P40422 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U5Q · 12 Subunit RNA Polymerase II at Room Temperature collected using SFX · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04050
- Every structure of UniProt P08518
- Every structure of UniProt P16370
- Every structure of UniProt P20433
- Every structure of UniProt P20434
- Every structure of UniProt P20435
- Every structure of UniProt P34087
- Every structure of UniProt P20436
- Every structure of UniProt P27999
- Every structure of UniProt P22139
- Every structure of UniProt P38902
- Every structure of UniProt P40422
- Elsewhere: RCSB PDB 5U5Q · PDBe 5U5Q · UniProt P04050 · UniProt P08518 · UniProt P16370 · UniProt P20433 · UniProt P20434 · UniProt P20435 · UniProt P34087 · UniProt P20436 · UniProt P27999 · UniProt P22139 · UniProt P38902 · UniProt P40422
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