MolNFT v1 · #134244 · protein
Near-atomic resolution cryo-EM reconstruction of peloruside-stabilized microtubule
5SYC: “Near-atomic resolution cryo-EM reconstruction of peloruside-stabilized microtubule”. Electron microscopy, 4 ligands (GTP, GDP, POU). MolNFT v1 #134244 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5SYC
- Type
- protein
- Length
- 850 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B6A7R0, P02554
- Ligands
- GTP, GDP, POU, MG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 424 | — | B6A7R0 |
| B | — | protein | 426 | — | P02554 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains A, B
- GDP · Guanosine-5'-diphosphate · ligand · chains B
- POU · Peloruside A · ligand · chains B
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5SYC · Near-atomic resolution cryo-EM reconstruction of peloruside-stabilized microtubule · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6A7R0
- Every structure of UniProt P02554
- Elsewhere: RCSB PDB 5SYC · PDBe 5SYC · UniProt B6A7R0 · UniProt P02554
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