MolNFT v1 · #129019 · protein
Crystal structure of the 4-fluoro rsl lectin in complex with lewis X tetrasaccharide
5O7W: “Crystal structure of the 4-fluoro rsl lectin in complex with lewis X tetrasaccharide”. X-ray diffraction, 5 ligands (NAG, FUC, GAL). MolNFT v1 #129019 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O7W
- Type
- protein
- Length
- 178 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D8NA05
- Ligands
- NAG, FUC, GAL, GLA, CA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 89 | — | D8NA05 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A, B
- FUC · alpha-L-fucopyranose · sugar · 3 copies · chains A, B
- GAL · beta-D-galactopyranose · sugar · 3 copies · chains A, B
- GLA · alpha-D-galactopyranose · sugar · chains B
- CA · Calcium ion · metal
- EDO · 1,2-ethanediol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O7W · Crystal structure of the 4-FLUORO RSL lectin in complex with Lewis x tetrasaccharide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D8NA05
- Elsewhere: RCSB PDB 5O7W · PDBe 5O7W · UniProt D8NA05
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