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MolNFT v1 · #128246 · protein

Crystal structure of the human KLHL3 kelch domain in complex with a WNK3 peptide

5NKP: “Crystal structure of the human KLHL3 kelch domain in complex with a WNK3 peptide”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #128246 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5NKP
Type
protein
Length
596 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9UH77, Q9BYP7
Ligands
CL

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein286—Q9UH77
B—protein289—Q9UH77
D—protein10—Q9BYP7
C—protein11—Q9BYP7

Ligands and binding sites

  • CL · Chloride ion · ion · 3 copies · chains A, D, B
  • CIT · Citric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5NKP · Crystal structure of the human KLHL3 Kelch domain in complex with a WNK3 peptide · the same entry in another collection · chain C against C, TM-score 1.00
  • Q9UH77 · AlphaFold monomer V2.0 prediction for kelch-like protein 3 (Q9UH77) · a predicted model of the same protein · chain A against A, TM-score 1.00
  • Q9BYP7 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase WNK3 (Q9BYP7) · a predicted model of the same protein · chain D against A, TM-score 0.59

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