MolNFT v1 · #11760 · protein
Crystal structure of the complex of concanavalin a and hexapeptide
1JW6: “Crystal structure of the complex of concanavalin a and hexapeptide”. X-ray diffraction, 3 ligands (PTD, MN, CA). MolNFT v1 #11760 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1JW6
- Type
- protein
- Length
- 243 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Concanavalin a; Protein (6-mer)
- UniProt
- P02866
- Ligands
- PTD, MN, CA
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Concanavalin a | protein | 237 | 4% helix, 49% strand | P02866 |
| B | Protein (6-mer) | protein | 6 | 0% helix, 0% strand | — |
Ligands and binding sites
- PTD · Pentanedial · ligand · chains A, B
- MN · Manganese (II) ion · metal · chains A
- CA · Calcium ion · metal · chains A
- IPA · Isopropyl alcohol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 444 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02866
- Elsewhere: RCSB PDB 1JW6 · PDBe 1JW6 · UniProt P02866
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