MolNFT v1 · #429918 · protein
AlphaFold monomer V2.0 prediction for DNA replication complex gins protein SLD5 (Q9BRT9)
Q9BRT9: “AlphaFold monomer V2.0 prediction for DNA replication complex gins protein SLD5 (Q9BRT9)”. 2 pockets (best druggability 0.51). MolNFT v1 #429918 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9BRT9
- Type
- protein
- Length
- 223 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB797235589280D92Ce4bA47be78Fa8180f655a40
- Molecule
- DNA replication complex gins protein SLD5
- UniProt
- Q9BRT9
- Pockets
- 2 · best druggability 0.51
Structure
1 distinct chain · 53% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA replication complex gins protein SLD5 | protein | 223 | 53% helix, 11% strand | Q9BRT9 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.51 | 0.78 | 30 | empty |
| 2 | 57 | 0.31 | 0.76 | 13 | empty |
Compared structures
- 8OK2 · Bipartite interaction of TOPBP1 with the GINS complex · an experimental structure of the same protein · chain A against D, TM-score 0.87
- 6XTX · Cryoem structure of human cmg bound to atpgammas and DNA · an experimental structure of the same protein · chain A against D, TM-score 0.86
- 6XTY · Cryoem structure of human cmg bound to and-1 (cmga) · an experimental structure of the same protein · chain A against D, TM-score 0.86
- 2Q9Q · The crystal structure of full length human gins complex · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 2Q9Q · The crystal structure of full length human GINS complex · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 2E9X · The crystal structure of human GINS core complex · an experimental structure of the same protein · chain A against D, TM-score 0.86
- 2E9X · The crystal structure of human gins core complex · an experimental structure of the same protein · chain A against D, TM-score 0.86
- 2EHO · Crystal structure of human gins complex · an experimental structure of the same protein · chain A against I, TM-score 0.81
- 2EHO · Crystal structure of human GINS complex · an experimental structure of the same protein · chain A against I, TM-score 0.81
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BRT9
- Elsewhere: UniProt Q9BRT9 · AlphaFold DB Q9BRT9
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