AlphaFold monomer V2.0 prediction for pre-mRNA-processing factor 17 (P40968)

Structure

1 distinct chain · 6% helix, 35% strand (DSSP).

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Compared structures

• 5YLZ · Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6… · an experimental structure of the same protein · chain A against T, TM-score 0.69
• 5YLZ · Cryo-EM structure of the post-catalytic spliceosome from saccharomyces cerevisiae at 3.6… · an experimental structure of the same protein · chain A against T, TM-score 0.69
• 6BK8 · S. cerevisiae spliceosomal post-catalytic P complex · an experimental structure of the same protein · chain A against M, TM-score 0.65
• 6EXN · Post-catalytic P complex spliceosome with 3' splice site docked · an experimental structure of the same protein · chain A against o, TM-score 0.64
• 6EXN · Post-catalytic P complex spliceosome with 3' splice site docked · an experimental structure of the same protein · chain A against o, TM-score 0.64
• 5MQ0 · Structure of a spliceosome remodeled for exon ligation · an experimental structure of the same protein · chain A against o, TM-score 0.61
• 5MPS · Structure of a spliceosome remodeled for exon ligation · an experimental structure of the same protein · chain A against o, TM-score 0.61
• 5GMK · Cryo-EM structure of the catalytic step I spliceosome (C complex) at 3.4 ångström… · an experimental structure of the same protein · chain A against n, TM-score 0.57
• 6J6Q · Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom · an experimental structure of the same protein · chain A against n, TM-score 0.57
• 6J6Q · Cryo-EM structure of the yeast B*-B2 complex at an average resolution of 3.7 ångström · an experimental structure of the same protein · chain A against n, TM-score 0.57
• 6J6N · Cryo-EM structure of the yeast B*-B1 complex at an average resolution of 3.86 ångström · an experimental structure of the same protein · chain A against n, TM-score 0.57
• 6J6G · Cryo-EM structure of the yeast B*-A2 complex at an average resolution of 3.2 ångström · an experimental structure of the same protein · chain A against n, TM-score 0.57

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P40968
• Elsewhere: UniProt P40968 · AlphaFold DB P40968