AlphaFold monomer V2.0 prediction for pre-mRNA-processing factor 17 (P40968)

Structure

1 distinct chain · 6% helix, 35% strand (DSSP).

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Compared structures

• 9DTR · Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution · an experimental structure of the same protein · chain A against o, TM-score 0.71
• 5YLZ · Cryo-EM structure of the post-catalytic spliceosome from saccharomyces cerevisiae at 3.6… · an experimental structure of the same protein · chain A against T, TM-score 0.69
• 5YLZ · Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6… · an experimental structure of the same protein · chain A against T, TM-score 0.69
• 6BK8 · S. cerevisiae spliceosomal post-catalytic P complex · an experimental structure of the same protein · chain A against M, TM-score 0.65
• 6BK8 · S. cerevisiae spliceosomal post-catalytic P complex · an experimental structure of the same protein · chain A against M, TM-score 0.65
• 6EXN · Post-catalytic P complex spliceosome with 3' splice site docked · an experimental structure of the same protein · chain A against o, TM-score 0.64
• 6EXN · Post-catalytic P complex spliceosome with 3' splice site docked · an experimental structure of the same protein · chain A against o, TM-score 0.64
• 5MQ0 · Structure of a spliceosome remodeled for exon ligation · an experimental structure of the same protein · chain A against o, TM-score 0.61
• 5MQ0 · Structure of a spliceosome remodeled for exon ligation · an experimental structure of the same protein · chain A against o, TM-score 0.61
• 5MPS · Structure of a spliceosome remodeled for exon ligation · an experimental structure of the same protein · chain A against o, TM-score 0.61
• 5MPS · Structure of a spliceosome remodeled for exon ligation · an experimental structure of the same protein · chain A against o, TM-score 0.61
• 5GMK · Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom… · an experimental structure of the same protein · chain A against n, TM-score 0.57

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P40968
• Elsewhere: UniProt P40968 · AlphaFold DB P40968