AlphaFold monomer V2.0 prediction for transcription TERMINATION/ANTITERMINATION protein nusa (P0AFF6)

Structure

1 distinct chain · 48% helix, 20% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 6FLQ · CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA · an experimental structure of the same protein · chain A against F, TM-score 0.76
• 6FLQ · Cryoem structure of E.COLI RNA polymerase paused elongation complex bound to nusa · an experimental structure of the same protein · chain A against F, TM-score 0.76
• 7PYK · CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA… · an experimental structure of the same protein · chain A against F, TM-score 0.75
• 7PY5 · CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (the… · an experimental structure of the same protein · chain A against F, TM-score 0.74
• 7PY3 · CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (the consensus… · an experimental structure of the same protein · chain A against F, TM-score 0.74
• 7PY6 · CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA… · an experimental structure of the same protein · chain A against F, TM-score 0.73
• 7PYJ · CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA… · an experimental structure of the same protein · chain A against F, TM-score 0.73
• 7PY7 · CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA… · an experimental structure of the same protein · chain A against F, TM-score 0.72
• 5MS0 · pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by… · an experimental structure of the same protein · chain A against M, TM-score 0.62
• 5MS0 · Pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by… · an experimental structure of the same protein · chain A against M, TM-score 0.62
• 5LM9 · Structure of E. COLI nusa · an experimental structure of the same protein · chain A against A, TM-score 0.58
• 5LM9 · Structure of E. coli NusA · an experimental structure of the same protein · chain A against A, TM-score 0.58

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P0AFF6
• Elsewhere: UniProt P0AFF6 · AlphaFold DB P0AFF6