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Crystal structure of compound 4F bound to large ribosomal subunit (50S) from deinococcus radiodurans

Analyse Crystal structure of compound 4F bound to large ribosomal subunit (50S) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4IOC
Type: protein + RNA
Length: 5,997 residues
Chains: 30
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9RXJ9, Q9RXK2, Q9RXK1, Q9RXJ0, Q9RSL3, Q9RSS7, Q9RXY1, Q9RXJ2, Q9RSK9, Q9RXJ5, Q9RSJ5, Q9RSL2, Q9RWB4, Q9RSW7, Q9RY64, Q9RXJ7, Q9RXK0, Q9RXJ1, Q9RX88, Q9RY65, Q9RRG8, Q9RXJ4, Q9RSL0, P49228, Q9RSS4, Q9RSH2, Q9RSW6, Q9RSK0

Structure

x-ray diffraction · 30 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
X	—	rna	2686	—	—
Y	—	rna	122	—	—
A	—	protein	240	—	Q9RXJ9
B	—	protein	205	—	Q9RXK2
C	—	protein	197	—	Q9RXK1
D	—	protein	177	—	Q9RXJ0
E	—	protein	171	—	Q9RSL3
F	—	protein	71	—	Q9RSS7
G	—	protein	142	—	Q9RXY1
H	—	protein	134	—	Q9RXJ2
I	—	protein	141	—	Q9RSK9
J	—	protein	136	—	Q9RXJ5
K	—	protein	113	—	Q9RSJ5
L	—	protein	104	—	Q9RSL2
M	—	protein	108	—	Q9RWB4
N	—	protein	117	—	Q9RSW7
O	—	protein	94	—	Q9RY64
P	—	protein	127	—	Q9RXJ7
Q	—	protein	93	—	Q9RXK0
R	—	protein	110	—	Q9RXJ1
S	—	protein	175	—	Q9RX88
T	—	protein	84	—	Q9RY65
U	—	protein	72	—	Q9RRG8
V	—	protein	66	—	Q9RXJ4
W	—	protein	55	—	Q9RSL0
Z	—	protein	58	—	P49228
1	—	protein	53	—	Q9RSS4
2	—	protein	46	—	Q9RSH2
3	—	protein	63	—	Q9RSW6
4	—	protein	37	—	Q9RSK0

Compared structures

4IOC · Crystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus… · the same entry in another collection · chain G against G, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9RXJ9
Every structure of UniProt Q9RXK2
Every structure of UniProt Q9RXK1
Every structure of UniProt Q9RXJ0
Every structure of UniProt Q9RSL3
Every structure of UniProt Q9RSS7
Every structure of UniProt Q9RXY1
Every structure of UniProt Q9RXJ2
Every structure of UniProt Q9RSK9
Every structure of UniProt Q9RXJ5
Every structure of UniProt Q9RSJ5
Every structure of UniProt Q9RSL2
Every structure of UniProt Q9RWB4
Every structure of UniProt Q9RSW7
Every structure of UniProt Q9RY64
Every structure of UniProt Q9RXJ7
Every structure of UniProt Q9RXK0
Every structure of UniProt Q9RXJ1
Every structure of UniProt Q9RX88
Every structure of UniProt Q9RY65
Every structure of UniProt Q9RRG8
Every structure of UniProt Q9RXJ4
Every structure of UniProt Q9RSL0
Every structure of UniProt P49228
Every structure of UniProt Q9RSS4
Every structure of UniProt Q9RSH2
Every structure of UniProt Q9RSW6
Every structure of UniProt Q9RSK0
Elsewhere: RCSB PDB 4IOC · PDBe 4IOC · UniProt Q9RXJ9 · UniProt Q9RXK2 · UniProt Q9RXK1 · UniProt Q9RXJ0 · UniProt Q9RSL3 · UniProt Q9RSS7 · UniProt Q9RXY1 · UniProt Q9RXJ2 · UniProt Q9RSK9 · UniProt Q9RXJ5 · UniProt Q9RSJ5 · UniProt Q9RSL2 · UniProt Q9RWB4 · UniProt Q9RSW7 · UniProt Q9RY64 · UniProt Q9RXJ7 · UniProt Q9RXK0 · UniProt Q9RXJ1 · UniProt Q9RX88 · UniProt Q9RY65 · UniProt Q9RRG8 · UniProt Q9RXJ4 · UniProt Q9RSL0 · UniProt P49228 · UniProt Q9RSS4 · UniProt Q9RSH2 · UniProt Q9RSW6 · UniProt Q9RSK0

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