Research workbench
Crystal structure of BBBB+UDP+GAL at pH 7.0 with mpd as the cryoprotectant
Analyse Crystal structure of BBBB+UDP+GAL at pH 7.0 with mpd as the cryoprotectant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4FRM
- Type
- protein
- Length
- 264 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histo-blood group abo system transferase
- EC
- 2.4.1.37
- UniProt
- H6A2X0
- Ligands
- UDP, GAL
- Pockets
- 1 · best druggability 0.48
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histo-blood group abo system transferase (EC 2.4.1.37) | protein | 264 | 33% helix, 22% strand | H6A2X0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 220 | 0.48 | 0.74 | 30 | UDP |
Compared structures
- 4FRM · Crystal Structure of BBBB+UDP+Gal at pH 7.0 with MPD as the cryoprotectant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt H6A2X0
- Elsewhere: RCSB PDB 4FRM · PDBe 4FRM · UniProt H6A2X0
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