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Structure of interleukin 1B solved by sad using an inserted lanthanide binding tag

Analyse Structure of interleukin 1B solved by sad using an inserted lanthanide binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3LTQ
Type
protein
Length
168 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Interleukin-1 beta
UniProt
P01584
Ligands
TB, SO4

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 49% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AInterleukin-1 betaprotein1688% helix, 49% strandP01584

Ligands and binding sites

  • TB · Terbium(iii) ion · metal · chains A
  • SO4 · Sulfate ion · ion · chains A
  • ACT · Acetate ion · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3LTQ · Structure of Interleukin 1B solved by SAD using an inserted Lanthanide Binding Tag · the same entry in another collection · chain A against A, TM-score 1.00
  • P01584 · AlphaFold monomer V2.0 prediction for interleukin-1 beta (P01584) · a predicted model of the same protein · chain A against A, TM-score 0.88

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