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Ligand · TB

TB · Terbium(iii) ion

TB, Terbium(iii) ion (Tb +3, 158.9 g/mol), in the MolNFT structures on GenesisL1: bound in 49 records (37 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
TB
Formula
Tb +3
Class
metal
Structures
49
PDB entries
37

Binding sites

TB in 49 structures; the first of them:

  • 5IZR · Human GIVD cytosolic phospholipase A2 in complex with Methyl gamma-Linolenyl… · TB A902 · binds ASP44, ASP66
  • 6F2F · Crystal structure of Protease 1 from Pyrococcus Horikoshii co-cystallized in presence of… · TB A204
  • 6F2H · Structure of Protease 1 from Pyrococcus horikoshii co-crystallized in presence of 10 mM… · TB C201 · binds ARG75
  • 6F2I · Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 · TB A201
  • 6F2J · Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4… · TB A201
  • 6F2M · Structure of the bacteriophage T5 distal tail protein pb9 co-crystallized with 10mM Tb-Xo4 · TB B301 · binds GLU18
  • 6H6N · UbiJ-SCP2 Ubiqui synthesis protein · TB A201 · binds GLU51
  • 6HF6 · Crystal structure of the Protease 1 (E29A,E60A,E80A) from Pyrococcus horikoshii… · TB A203
  • 6QSS · Crystal Structure of Ignicoccus islandicus malate dehydrogenase co-crystallized with 10… · TB A402 · binds ASP135

Residues it binds most

GLU 172, ASP 91, HIS 41, GLN 27, ASN 13, LYS 17, ARG 16, TRP 11, GLY 4, THR 3 (residue and the binding sites it lines).

Found with

  • 7MT · Tb-Xo4
  • CL · Chloride ion
  • NA · Sodium ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • CA · Calcium ion
  • GOL · Glycerol
  • MG · Magnesium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • IOD · Iodide ion
  • 2HA · Dihydroxyacetone
  • FMN · Flavin mononucleotide

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