GL1X · GenesisL1 explorer

Research workbench

Crystal structure of BRCA1 brct in complex with a minimal recognition tetrapeptide with a free carboxy C-terminus.

Analyse Crystal structure of BRCA1 brct in complex with a minimal recognition… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3K0K
Type
protein
Length
215 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Breast cancer type 1 susceptibility protein; Phospho peptide psptf-cooh
UniProt
P38398
Ligands
NI, CL

Structure

x-ray diffraction · 2 distinct chains · 32% helix, 18% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABreast cancer type 1 susceptibility proteinprotein21132% helix, 18% strandP38398
BPhospho peptide psptf-coohprotein40% helix, 0% strand—

Ligands and binding sites

  • NI · Nickel (II) ion · metal · chains A
  • CL · Chloride ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 381 Ų buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 modified (phosphorylation).

Compared structures

  • 3K0K · Crystal Structure of BRCA1 BRCT in complex with a minimal recognition tetrapeptide with a… · the same entry in another collection · chain A against A, TM-score 1.00
  • P38398 · AlphaFold monomer V2.0 prediction for breast cancer type 1 susceptibility protein (P38398) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.