Research workbench
Crystal structure of the N-terminal region of the scallop myosin rod, monoclinic (P21) form
Analyse Crystal structure of the N-terminal region of the scallop myosin rod… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3BAT
- Type
- protein
- Length
- 323 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Myosin heavy chain, striated MUSCLE/GENERAL control protein GCN4
- UniProt
- P24733, P03069
- Pockets
- 3 · best druggability 0.30
Structure
x-ray diffraction · 4 distinct chains · 94% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myosin heavy chain, striated MUSCLE/GENERAL control protein GCN4 | protein | 77 | 94% helix, 0% strand | P24733, P03069 |
| B | Myosin heavy chain, striated MUSCLE/GENERAL control protein GCN4 | protein | 81 | 96% helix, 0% strand | P24733, P03069 |
| C | Myosin heavy chain, striated MUSCLE/GENERAL control protein GCN4 | protein | 85 | 92% helix, 0% strand | P24733, P03069 |
| D | Myosin heavy chain, striated MUSCLE/GENERAL control protein GCN4 | protein | 80 | 95% helix, 0% strand | P24733, P03069 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.30 | 0.73 | 15 | empty |
| 2 | 54 | 0.29 | 0.75 | 13 | empty |
| 3 | 56 | 0.26 | 0.72 | 10 | empty |
Interfaces
5 interfaces between chains.
- C–D · 2241 Ų buried · 13 hydrogen bonds · protein-protein
- A–B · 2130 Ų buried · 12 hydrogen bonds · protein-protein
- A–C · 397 Ų buried · 5 hydrogen bonds · protein-protein
- B–D · 380 Ų buried · 7 hydrogen bonds · protein-protein
- B–C · 29 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 3BAT · Crystal structure of the N-terminal region of the scallop myosin rod, monoclinic (P21)… · the same entry in another collection · chain A against A, TM-score 1.00
- P24733 · AlphaFold monomer V2.0 prediction for myosin heavy chain, striated muscle (P24733) · a predicted model of the same protein · chain A against A, TM-score 0.84
- P03069 · AlphaFold monomer V2.0 prediction for general control transcription factor GCN4 (P03069) · a predicted model of the same protein · chain A against A, TM-score 0.68
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24733
- Every structure of UniProt P03069
- Elsewhere: RCSB PDB 3BAT · PDBe 3BAT · UniProt P24733 · UniProt P03069
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