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Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2 and coenzyme a
Analyse Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ZW7
- Type
- protein
- Length
- 586 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bleomycin acetyltransferase
- UniProt
- Q53796
- Ligands
- BLM, COA
- Pockets
- 6 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Bleomycin acetyltransferase | protein | 293 | 26% helix, 34% strand | Q53796 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1108 | 0.81 | 0.82 | 118 | empty |
| 2 | 311 | 0.75 | 0.87 | 45 | empty |
| 3 | 418 | 0.74 | 0.84 | 51 | COA |
| 4 | 229 | 0.52 | 0.76 | 22 | empty |
| 5 | 100 | 0.44 | 0.78 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 2373 Ų buried · 28 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 2ZW7 · Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2 and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q53796
- Elsewhere: RCSB PDB 2ZW7 · PDBe 2ZW7 · UniProt Q53796
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