Research workbench
Crystal structure of human galectin-9 N-terminal crd in complex with N-acetyllactosamine trimer (crystal 2)
Analyse Crystal structure of human galectin-9 N-terminal crd in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ZHN
- Type
- protein
- Length
- 145 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Galectin-9
- UniProt
- O00182
- Ligands
- RPN, NAG, GAL
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Galectin-9 | protein | 145 | 2% helix, 52% strand | O00182 |
Ligands and binding sites
- RPN · (R)-1-para-nitro-phenyl-2-azido-ethanol · ligand
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A
- GAL · beta-D-galactopyranose · sugar · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2ZHN · Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine… · the same entry in another collection · chain A against A, TM-score 1.00
- O00182 · AlphaFold monomer V2.0 prediction for galectin-9 (O00182) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00182
- Elsewhere: RCSB PDB 2ZHN · PDBe 2ZHN · UniProt O00182
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