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Ligand · RPN

RPN · (R)-1-para-nitro-phenyl-2-azido-ethanol

RPN, (R)-1-para-nitro-phenyl-2-azido-ethanol (C8 H8 N4 O3, 208.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
RPN
Formula
C8 H8 N4 O3
Class
ligand
Structures
6
PDB entries
3

Binding sites

RPN in 6 structures; the first of them:

  • 1PX0 · Crystal structure of the haloalcohol dehalogenase HheC complexed with the haloalcohol… · RPN A1001 · binds PHE12, PRO84, PHE86, SER132, THR134, TRP139, TYR145, PRO175 and 6 more
  • 2ZHM · Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine… · RPN A1001
  • 2ZHN · Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine… · RPN A1168
  • 1PX0 · Crystal structure of the haloalcohol dehalogenase hhec complexed with the haloalcohol… · RPN A1001 · binds PHE12, PRO84, PHE86, SER132, THR134, TRP139, TYR145, PRO175 and 6 more
  • 2ZHM · Crystal structure of human galectin-9 N-terminal crd in complex with N-acetyllactosamine… · RPN A1001
  • 2ZHN · Crystal structure of human galectin-9 N-terminal crd in complex with N-acetyllactosamine… · RPN A1168

Residues it binds most

PHE 8, TYR 8, PRO 8, TRP 8, LEU 8, THR 8, ASN 8, SER 8 (residue and the binding sites it lines).

Found with

  • GAL · beta-D-galactopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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