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Re-refinement of integrin ALPHAIIBBETA3 headpiece bound to antagonist eptifibatide

Analyse Re-refinement of integrin ALPHAIIBBETA3 headpiece bound to antagonist… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2VDN
Type
protein
Length
1,346 residues
Chains
5
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P08514, P05106

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein452—P08514
B—protein455—P05106
C—protein6——
H—protein219——
L—protein214——

Compared structures

  • 2VDN · Re-refinement of Integrin AlphaIIbBeta3 Headpiece Bound to Antagonist Eptifibatide · the same entry in another collection · chain A against A, TM-score 1.00
  • P08514 · AlphaFold monomer V2.0 prediction for integrin alpha-iib (P08514) · a predicted model of the same protein · chain A against A, TM-score 1.00

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